PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC009465.40
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 59aa    MW: 6946.07 Da    PI: 10.5593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC009465.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.6e-14247655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  +++Er RR +i +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  EcC009465.40  2 SIAERVRRTKISERIRRLQDLVPNM----DKQTNTADMLDLAVDYIKELQ 47
                  589*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.408146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.80E-9151No hitNo description
PfamPF000101.7E-11247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-16255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-17255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.7E-14252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005886Cellular Componentplasma membrane
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 59 aa     Download sequence    Send to blast
RSIAERVRRT KISERIRRLQ DLVPNMDKQT NTADMLDLAV DYIKELQGQV KVTHEPKKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003574744.15e-26PREDICTED: transcription factor bHLH130-like
SwissprotQ9C6908e-25BH122_ARATH; Transcription factor bHLH122
TrEMBLW5IA722e-27W5IA72_WHEAT; Uncharacterized protein
STRINGMLOC_30102.21e-25(Hordeum vulgare)
STRINGMLOC_67834.12e-25(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.15e-26bHLH family protein